diff --git a/cli/packages/api/api.go b/cli/packages/api/api.go
index d438adb33..1b69b8f23 100644
--- a/cli/packages/api/api.go
+++ b/cli/packages/api/api.go
@@ -145,6 +145,25 @@ func CallLogin2V2(httpClient *resty.Client, request GetLoginTwoV2Request) (GetLo
 	return loginTwoV2Response, nil
 }
 
+func CallGetAllOrganizations(httpClient *resty.Client) (GetOrganizationsResponse, error) {
+	var orgResponse GetOrganizationsResponse
+	response, err := httpClient.
+		R().
+		SetResult(&orgResponse).
+		SetHeader("User-Agent", USER_AGENT).
+		Get(fmt.Sprintf("%v/v1/organization", config.INFISICAL_URL))
+
+	if err != nil {
+		return GetOrganizationsResponse{}, err
+	}
+
+	if response.IsError() {
+		return GetOrganizationsResponse{}, fmt.Errorf("CallGetAllOrganizations: Unsuccessful response: [response=%v]", response)
+	}
+
+	return orgResponse, nil
+}
+
 func CallGetAllWorkSpacesUserBelongsTo(httpClient *resty.Client) (GetWorkSpacesResponse, error) {
 	var workSpacesResponse GetWorkSpacesResponse
 	response, err := httpClient.
diff --git a/cli/packages/api/model.go b/cli/packages/api/model.go
index 67ac97c25..586a23511 100644
--- a/cli/packages/api/model.go
+++ b/cli/packages/api/model.go
@@ -120,14 +120,21 @@ type PullSecretsByInfisicalTokenResponse struct {
 
 type GetWorkSpacesResponse struct {
 	Workspaces []struct {
-		ID           string `json:"_id"`
-		Name         string `json:"name"`
-		Plan         string `json:"plan,omitempty"`
-		V            int    `json:"__v"`
-		Organization string `json:"organization,omitempty"`
+		ID             string `json:"_id"`
+		Name           string `json:"name"`
+		Plan           string `json:"plan,omitempty"`
+		V              int    `json:"__v"`
+		OrganizationId string `json:"orgId"`
 	} `json:"workspaces"`
 }
 
+type GetOrganizationsResponse struct {
+	Organizations []struct {
+		ID   string `json:"id"`
+		Name string `json:"name"`
+	} `json:"organizations"`
+}
+
 type Secret struct {
 	SecretKeyCiphertext     string `json:"secretKeyCiphertext,omitempty"`
 	SecretKeyIV             string `json:"secretKeyIV,omitempty"`
@@ -505,5 +512,5 @@ type GetRawSecretsV3Response struct {
 		SecretComment string `json:"secretComment"`
 	} `json:"secrets"`
 	Imports []any `json:"imports"`
-	ETag		string
+	ETag    string
 }
diff --git a/cli/packages/cmd/init.go b/cli/packages/cmd/init.go
index 070074fa9..e47eb447e 100644
--- a/cli/packages/cmd/init.go
+++ b/cli/packages/cmd/init.go
@@ -5,7 +5,6 @@ package cmd
 
 import (
 	"encoding/json"
-	"fmt"
 
 	"github.com/Infisical/infisical-merge/packages/api"
 	"github.com/Infisical/infisical-merge/packages/models"
@@ -52,25 +51,19 @@ var initCmd = &cobra.Command{
 
 		httpClient := resty.New()
 		httpClient.SetAuthToken(userCreds.UserCredentials.JTWToken)
-		workspaceResponse, err := api.CallGetAllWorkSpacesUserBelongsTo(httpClient)
+
+		organizationResponse, err := api.CallGetAllOrganizations(httpClient)
 		if err != nil {
-			util.HandleError(err, "Unable to pull projects that belong to you")
+			util.HandleError(err, "Unable to pull organizations that belong to you")
 		}
 
-		workspaces := workspaceResponse.Workspaces
-		if len(workspaces) == 0 {
-			message := fmt.Sprintf("You don't have any projects created in Infisical. You must first create a project at %s", util.INFISICAL_TOKEN_NAME)
-			util.PrintErrorMessageAndExit(message)
-		}
+		organizations := organizationResponse.Organizations
 
-		var workspaceNames []string
-		for _, workspace := range workspaces {
-			workspaceNames = append(workspaceNames, workspace.Name)
-		}
+		organizationNames := util.GetOrganizationsNameList(organizationResponse)
 
 		prompt := promptui.Select{
-			Label: "Which of your Infisical projects would you like to connect this project to?",
-			Items: workspaceNames,
+			Label: "Which Infisical organization would you like to select a project from?",
+			Items: organizationNames,
 			Size:  7,
 		}
 
@@ -79,7 +72,27 @@ var initCmd = &cobra.Command{
 			util.HandleError(err)
 		}
 
-		err = writeWorkspaceFile(workspaces[index])
+		selectedOrganization := organizations[index]
+
+		workspaceResponse, err := api.CallGetAllWorkSpacesUserBelongsTo(httpClient)
+		if err != nil {
+			util.HandleError(err, "Unable to pull projects that belong to you")
+		}
+
+		filteredWorkspaces, workspaceNames := util.GetWorkspacesInOrganization(workspaceResponse, selectedOrganization.ID)
+
+		prompt = promptui.Select{
+			Label: "Which of your Infisical projects would you like to connect this project to?",
+			Items: workspaceNames,
+			Size:  7,
+		}
+
+		index, _, err = prompt.Run()
+		if err != nil {
+			util.HandleError(err)
+		}
+
+		err = writeWorkspaceFile(filteredWorkspaces[index])
 		if err != nil {
 			util.HandleError(err)
 		}
diff --git a/cli/packages/models/cli.go b/cli/packages/models/cli.go
index 71033fe72..c3999f68b 100644
--- a/cli/packages/models/cli.go
+++ b/cli/packages/models/cli.go
@@ -45,11 +45,11 @@ type SingleFolder struct {
 }
 
 type Workspace struct {
-	ID           string `json:"_id"`
-	Name         string `json:"name"`
-	Plan         string `json:"plan,omitempty"`
-	V            int    `json:"__v"`
-	Organization string `json:"organization,omitempty"`
+	ID             string `json:"_id"`
+	Name           string `json:"name"`
+	Plan           string `json:"plan,omitempty"`
+	V              int    `json:"__v"`
+	OrganizationId string `json:"orgId"`
 }
 
 type WorkspaceConfigFile struct {
diff --git a/cli/packages/util/init.go b/cli/packages/util/init.go
new file mode 100644
index 000000000..33350f3b7
--- /dev/null
+++ b/cli/packages/util/init.go
@@ -0,0 +1,45 @@
+package util
+
+import (
+	"fmt"
+
+	"github.com/Infisical/infisical-merge/packages/api"
+	"github.com/Infisical/infisical-merge/packages/models"
+)
+
+func GetOrganizationsNameList(organizationResponse api.GetOrganizationsResponse) []string {
+	organizations := organizationResponse.Organizations
+
+	if len(organizations) == 0 {
+		message := fmt.Sprintf("You don't have any organization created in Infisical. You must first create a organization at %s", INFISICAL_DEFAULT_URL)
+		PrintErrorMessageAndExit(message)
+	}
+
+	var organizationNames []string
+	for _, workspace := range organizations {
+		organizationNames = append(organizationNames, workspace.Name)
+	}
+
+	return organizationNames
+}
+
+func GetWorkspacesInOrganization(workspaceResponse api.GetWorkSpacesResponse, orgId string) ([]models.Workspace, []string) {
+	workspaces := workspaceResponse.Workspaces
+
+	var filteredWorkspaces []models.Workspace
+	var workspaceNames []string
+
+	for _, workspace := range workspaces {
+		if workspace.OrganizationId == orgId {
+			filteredWorkspaces = append(filteredWorkspaces, workspace)
+			workspaceNames = append(workspaceNames, workspace.Name)
+		}
+	}
+
+	if len(filteredWorkspaces) == 0 {
+		message := fmt.Sprintf("You don't have any projects created in Infisical organization. You must first create a project at %s", INFISICAL_DEFAULT_URL)
+		PrintErrorMessageAndExit(message)
+	}
+
+	return filteredWorkspaces, workspaceNames
+}